SECISearch 2.19

ATTENTION: there are NO selenoproteins in higher plants!

Pattern: Search complementary strand
Use custom energy cutoffs
(Specifying these parameters will overwrite default settings for choosen pattern)
Core structure energy Overall structure energy
Allow hits overlapping
Use fine structural features filters:
Y-filter
O-filter
B-filter
S-filter
Sequence name (optional):
Choose file

or enter your sequence here:

Credits: SECISearch uses PatScan and RNAfold from Vienna RNA Package.
If SECISearch was useful for your research you may cite the following paper:

Kryukov, G. V., Castellano, S., Novoselov, S. V., Lobanov, A. V., Zehtab, O., Guigo R, Gladyshev, V. N. Characterization of mammalian selenoproteomes (2003) Science, 300, 1439-1443 [Abstract].
You can also access the free full text through the link on the following page.

Please send questions and comments to lobanov@genomics.unl.edu